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Herbert J. Bernstein, yayahjb at gmail dot com
Nicholas K. Sauter, nksauter at lbl dot gov
Robert M. Sweet, rsweet at bnl dot gov
The High Data-Rate MX meeting at BNL series has been sponsored in part by Dectris Ltd of Baden Switzerland.
This is the first of a series of three meetings to be run in Spring and Summer 2016 on changes needed to existing major software packages for support of very high data rate macromolecular crystallography. Additional support is being requested in parallel from Dectris, Ltd of Baden Switzerland, NIH/NIGMS and DOE/BER. To ensure maximum participation across the community, the sessions will be held at three geographically distributed locations. The first meeting will be on 26 -- 28 May 2016 at National Synchrotron Light Source II at Brookhaven National Laboratory, Upton, NY, USA. The second meeting will be an informal session during the meeting of the American Crystallographic Association in Denver, Colorado, USA, 22 -- 26 July 2016. The support being requested from NSF in this proposal is primarily for support fo The third meeting will be on 2 September 2016, as a satellite meeting to the European Crystallograhic Meeting in Basel, Switzerland, 28 August 1 September 2016. Registration for the third meeting is open at http://ecm30.ecanews.org/satellitemeetings/high-data-rate-mx-satellite-meeting.html. To date, a very helpful funding commitments from Dectris of Baden, Switzerland, LSBR at BNL and from NIGMS have been received.
Note: Until and unless specific arrangements have been made, all attendees need to assume full responsibiity for their expenses, including but not limited to transportation, food and accommodations. As of this writing (7 May 2016) the funding commitments in hand are sufficient to pay for food and hotels for the accepted participants at the May meeting, and to support a small portion of some transportation costs for the May meeting. Participants are completely responsible for costs for the July and September meetings.
Note: Due to various rules and policies, even though we expect to be able to cover food during the May meeting, we will not be able to cover expenses for alcoholic beverages. That is something attendees must pay for themselves.
Attendees in need of accommodations for the meeting should reserve a room at
Hampton Inn Long Island/Brookhaven
2000 North Ocean Avenue, Farmingville, NY 11738
PHONE: +1-631-732-7300
You may book your room using this booking link:
or calling +1-800-HAMPTON (+1-800-426-7866) and referencing the High Data-Rate MX Meeting no later than 24 April 2016. The agreed rate is $119 per night for checkin 25 May 2016, and is subject to state sales and occupancy taxes, which currently are a combined total of 11.625% per room per night and are subject to change without notice.
For those who are interested, we will have working dinners at Perabell Patchogue, 69 E. Main Street, Patchogue, NY 11772, +1-631-447-7766, 6:30 pm, Thursday, 26 May 2016, and at La Margherita, 1229 Station Rd, Medford, NY 11763, 1-631-924-0048, 6:30 pm, Fridat, 27 May 2016. In order to allow us to reserve enough space and to organize transportation, if you wish to participate in these dinners, please provide the following information: the nights you will participate, whether you will need transportation, or can help with transportation, and any special dietary requirements.
Our thanks to Dectris, Ltd., whose sponsorship is supporting these working dinners.
The menu for the dinner at Perabell, 6:30 pm, Thursday, 26 May 2016 is:
The menu for La Margherita, 6:30 pm, Friday, 26 May 2016 is at http://www.lamargheritapizza.com/menu.html. We will cover either pizza or regular Italian entrees and sides to a budget limit of $30 a head. The pizza is particularly good. We will cover coffee and soda. Cash bar at particpant's expense for alcoholic beverages
In order to conform to U.S. Department of Energy regulations, the number at attendees at the meeting in-site at BNL is limited. Both for that reason and in order to accommodate people who need to particpate but who have sceduling conflicts, we will support remote access to this meeting. If you wish to participate either on-site or electronically please send an e-mail with "HDRMX" in the subject line to.
Note added 7 May 2016: *** We regret that we cannot accept additional on-site participants at of this date, but a few additional electronic participants could be accepted. *** The following information is left posted including the on-site information for the record.
During the meeting the best contact for participants in need of guidance or for external people trying to locate a meeting participant is Jean Smiles, NSLS-II Photon Science Division, work +1-631-344-4696, cell +1-631-404-8938
The participants in the May meeting were:
Name | Institution | |||||
---|---|---|---|---|---|---|
On-site Participants | ||||||
Mark Hilgart | APS Argonne National Laboratory | |||||
Jun Aishima | Australian Synchrotron | |||||
Tom Caradoc-Davies | Australian Synchrotron | |||||
Kaden Badalian | Binghamton University | |||||
Frances C. Bernstein | Brookhaven National Laboratory (ret.) | |||||
Andreas Förster | DECTRIS Ltd. | |||||
Markus Mathes | DECTRIS Ltd. | |||||
Eugen Wintersberger | Deutsches Elektronen-Synchrotron | |||||
David Hall | Diamond Light Source | |||||
Graeme Winter | Diamond Light Source | |||||
Andrew Hammersley | European Synchrotron Radiation Facility | |||||
Gerard Bricogne | Global Phasing Ltd. | |||||
Clemens Vonrhein | Global Phasing Ltd. | |||||
Aaron Brewster | Lawrence Berkeley National Laboratory | |||||
Nicholas K. Sauter | Lawrence Berkeley National Laboratory | |||||
Jie Nan | MAX IV Lund University | |||||
Harry Powell | MRC Laboratory of Molecular Biology (ret.) | |||||
Matt Cowan | NSLS-II Brookhaven National Laboratory | |||||
Martin Fuchs | NSLS-II Brookhaven National Laboratory | |||||
Jean Jakoncic | NSLS-II Brookhaven National Laboratory | |||||
Robert Petkus | NSLS-II Brookhaven National Laboratory | |||||
Alexei Soares | NSLS-II Brookhaven National Laboratory | |||||
Dieter Schneider | NSLS-II Brookhaven National Laboratory | |||||
John Skinner | NSLS-II Brookhaven National Laboratory | |||||
Bob Sweet | NSLS-II Brookhaven National Laboratory | |||||
Kerstin Kleese van Dam | CSI Brookhaven National Laboratory | |||||
Xiaochun Yang | NY Structural Biology Consortium | |||||
Seetharaman Jayaraman | NY Structural Biology Consortium | |||||
Herbert J. Bernstein | Rochester Institute of Technology | |||||
Simon Ebner | SLS Paul Scherrer Institut | |||||
Ezequiel Panepucci | SLS Paul Scherrer Institut | |||||
Justyna Aleksandra Wojdyla | SLS Paul Scherrer Institut | |||||
Martin Savko | SOLEIL Synchrotron | |||||
Elena Pourmal | The HDF Group | |||||
James Holton | UCSF/LBNL/SLAC | |||||
Wladek Minor | University of Virginia | |||||
Electronic Participants | ||||||
Nukri Sanishvili | APS Argonne National Laboratory, GMCA-CAT | |||||
Kevin Battaile | APS Argonne National Laboratory, IMCA-CAT | |||||
Joe Digilio | APS Argonne National Laboratory, IMCA-CAT | |||||
Erica Dugrid | APS Argonne National Laboratory, IMCA-CAT | |||||
Spencer Anderson | APS Argonne National Laboratory, LS-CAT | |||||
Joe Brunzelle | APS Argonne National Laboratory, LS-CAT | |||||
Keith Brister | APS Argonne National Laboratory, LS-CAT | |||||
Surajit Banerjee | APS Argonne National Laboratory, NE-CAT | |||||
David Neau | APS Argonne National Laboratory, NE-CAT | |||||
Frank Murphy | APS Argonne National Laboratory, NE-CAT | |||||
K. Rajasankar | APS Argonne National Laboratory, NE-CAT | |||||
Jon Schuermann | APS Argonne National Laboratory, NE-CAT | |||||
James P. Withrow | APS Argonne National Laboratory, NE-CAT | |||||
Steve Ginell | APS Argonne National Laboratory, SBC CAT | |||||
Chris Lazarski | APS Argonne National Laboratory, SBC-CAT | |||||
John Chrzas | APS Argonne National Laboratory, SER-CAT | |||||
Albert Fu | APS Argonne National Laboratory, SER-CAT | |||||
Zhongmin Jin | APS Argonne National Laboratory, SER-CAT | |||||
Daniel Eriksson | Australian Synchrotron | |||||
Vesna Samardzic-Boban | Australian Synchrotron | |||||
Stefan Brandstetter | DECTRIS Ltd. | |||||
Gleb Bourenkov | EMBL | |||||
Alexander Popov | European Synchrotron Radiation Facility | |||||
Go Ueno | SPring-8 | |||||
Kazuya Hasegawa | SPring-8 | |||||
Keitaro Yamashita | SPring-8 | |||||
Thomas Eriksson | SSRL SLAC National Accelerator Laboratory | |||||
Takanori Nakane | The University of Tokyo | |||||
Kay Diederichs | Universität Konstanz |
This is the 30 May 2016 final agenda for the BNL HDRMX Meeting 26 -- 28 May 2016 as given | ||||||
---|---|---|---|---|---|---|
Day | Talk # | Start time | Duration | |||
25-May-16 | attendee travel and arrival at hotel, unless already attending NSLS-II User Meeting | |||||
26-May-16 | HDRMX Meeting, Biology Large Seminar Room, Room 157, Bldg 463B, BNL, DAY 1 | |||||
8:30 | 0:30 | Coffee, Tea, Juice, setup for e-particpants | ||||
Introducing the Problem, R. M. Sweet and N. K. Sauter, presiding | ||||||
1 | 9:00 | 0:10 | Robert M. Sweet, BNL, Welcome | |||
2 | 9:10 | 0:15 | Herbert J. Bernstein, RIT, Statement of the Problem and Charge to the Meeting | |||
3 | 9:25 | 0:15 | Nicholas K. Sauter, Graeme Winter, Presentation of the DIALS approach to handling Eiger images in spot-finding and processing pptx | |||
4 | 9:40 | 0:15 | K. Diederichs (remotely), A. Förster, C. Vonrhein, G. Bricogne, Presentation of the XDS approach to handling Eiger images slides | |||
5 | 9:55 | 0:15 | W. Minor, Presentation of the HKL approach to handling Eiger images slides | |||
6 | 10:10 | 0:15 | H. Powell, Presentation of the Mosflm approach to handling Eiger images slides ppt | |||
10:25 | 0:35 | Coffee/Tea Break | ||||
Dectris Eiger Capabilities, H. J. Bernstein presiding | ||||||
1 | 11:00 | 0:15 | A. Förster, Dectris, Presentation of the Eiger hardware slides | |||
2 | 11:15 | 0:15 | M. Mathes, Dectris, Presentation of the Eiger data format(s) and software slides | |||
3 | 11:30 | 0:15 | Elena Pourmal, HDF Group, Presentation of relevant HDF5 features slides pptx | |||
4 | 11:45 | 0:15 | James Holton, SLAC, Presentation on simulation, flicker, etc. in HDRMX environment slides | |||
12:00 | 1:00 | Working lunch -- takeout from Benten and Five Brothers Deli | ||||
1:00 | 1:15 | Group photo | ||||
Presentations of Facilities current and planned relevant computational and network capabilities, J. Jakoncic, presiding, to get constraints and commonalities in solutions | ||||||
1 | 13:15 | 0:15 | Kerstin Kleese van Dam, BNL, CSI ppt | |||
1 | 13:30 | 0:15 | Robert Petkus, BNL, NSLS-II slides | |||
2 | 13:45 | 0:15 | Ezequiel Panepucci, SLS slides | |||
3 | 14:00 | 0:15 | Graeme Winter, DLS pptx | |||
4 | 14:15 | 0:15 | Thomas Eriksson (remotely), SLAC slides | |||
5 | 14:30 | 0:15 | Andrew P. Hammersley, ESRF slides ppt | |||
14:45 | 0:45 | Beamline Tour and Coffee/Tea Break | ||||
6 | 15:30 | 0:15 | Martin Savko, SOLEIL slides | |||
7 | 15:45 | 0:15 | Mark Hilgart, APS slides | |||
8 | 16:00 | 0:15 | Jie Nan, Max IV slides | |||
9 | 15:15 | 0:15 | Tom Caradoc-Davies, Australian Synchrotron slides | |||
10 | 16:30 | 0:15 | Eugen Wintersberger, DESY slides | |||
Facilitated group discussion laying out action items for programming sessions,H. J. Bernstein, presiding | ||||||
16:30 | 0:30 | Facilitated discussion, all participants | ||||
17:00 | 1:30 | Break for travel to dinner | ||||
18:30 | 2:00 | Working dinner in Perabell Patchogue, 69 E. Main Street, Patchogue, NY 11772, +1-631-447-7766 | ||||
27-May-16 | HDRMX Meeting, Room 5L156, Bldg 745, NSLS-II, BNL, DAY 2 | |||||
8:30 | 0:30 | Coffee, Tea, Juice, setup for e-particpants | ||||
Parallel software and beamlines/controls meetings | ||||||
Software/programming group, H. J. Bernstein moderator | ||||||
Beamlines/controls group, G. Winter, moderator | ||||||
9:00 | 1:30 | Parallel facilitated meetings | ||||
10:30 | 0:30 | Coffee/Tea Break | ||||
Joint meeting to discuss progress, H. J. Bernstein, moderator | ||||||
11:00 | 1:00 | Joint meeting to discuss progress, H. J. Bernstein, moderator | ||||
12:00 | 1:30 | Working lunch -- takeout from Five Brothers Deli | ||||
13:30 | 1:00 | Joint meeting, Facilitated group discussion starting on draft report and laying out further action items | ||||
14:30 | 0:30 | Coffee/Tea Break | ||||
15:00 | 2:00 | Joint meeting, Facilitated group discussion continued on draft report and laying out further action items | ||||
17:00 | 1:30 | Break for travel to dinner | ||||
18:30 | 2:00 | Working Dinner at La Margherita, 1229 Station Rd, Medford, NY 11763, 1-631-924-0048 | ||||
28-May-16 | HDRMX Meeting, Room 5L156, Bldg 745, NSLS-II, BNL, DAY 3 | |||||
8:30 | 0:30 | Coffee, Tea, Juice, setup for e-particpants | ||||
Joint meeting to draft report, H. J. Bernstein, moderating | ||||||
9:00 | 1:30 | Joint meeting to draft report, H. J. Bernstein, moderating | ||||
10:30 | 0:30 | Coffee/Tea Break | ||||
Joint meeting to discuss progress, H. J. Bernstein, moderator | ||||||
11:00 | 1:00 | Joint meeting to finish draft report and lay out tasks to be finished via email | ||||
12:00 | 1:30 | Working lunch -- takeout from Five Brothers Deli | ||||
13:30 | 1:00 | People leaving that evening depart; Special session for DIALS issues discussion, and other special breakouts. | ||||
14:30 | 0:30 | Coffee/Tea Break | ||||
15:00 | 2:00 | Other special discussions. | ||||
17:00 | Meeting ends |